Rcmde-gsd: Building Global Hierarchical Classifiers Using Differential Evolution for Predicting Gene Ontology Terms

نویسندگان

  • Rafael Abud Menezes
  • Julio Cesar Nievola
چکیده

In this work, we present a method to the building of a global hierarchical classification of the proteins functions for a structure of classes represented by a DAG (Directed Acyclic Graph), called RCMDE-GSD (Rule Construction Method Using Differential Evolution-Global Single DAG). Here, we compare RCMDE-GSD with hAntMiner, a method based on ACO (Ant Colony Optimization) algorithm and with HLCS, a method based on Learning Classifier Systems. In all the experiments, RCMDEGSD outperformed or had similar results with at least one of the other two algorithms. Using Kruskal Wallis test, we conclude that the difference between the three algorithms was nonsignificant. Keywords— Hierarchical classifiers; DAG; classes.

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تاریخ انتشار 2014